risk: 1.5
SCRATCH: outfiles
indivname: indiv1.dat
snpname: snp.dat
genotypename: genodata
badsnpname: badsnps
tlreest: YES
seed: 1011
splittau: YES
fancyxtheta: YES
output: SCRATCH/act.out
trashdir: /cvar/popgen01/junk
checkit: NO
details: NO
numburn: 100
numiters: 200
emiter: 30
dotoysim: NO
cleaninit: YES
reestiter: 5
thetafilename: SCRATCH/theta.out
lambdafilename: SCRATCH/lambda.out
freqfilename: SCRATCH/freq.out
indoutfilename: SCRATCH/ind.out
snpoutfilename: SCRATCH/snp.out
ethnicfilename: SCRATCH/ethnic.out
##noxdata: 0
##fakespacing: 0.01
##thxpars: 40.0 1.0 10.0
##thpars: 1.0 5.0
##lampars: 1.0 0.1
##lamxpars: 1.0 0.1
##markersim: 200
##simnumindivs: 1000
##risksim: 1.0
##tauscal: 100 100
##wrisk: 1.0
##lrisk: -1.0
##controlrisk: 1.0
##risk2: 2.25
##taulsdev: 0.5
##taulmean: 2.0
##allmale: 0
##allcases: 0
##usecontrols: 1
##pubfmodern: 0
##pubxname: SCRATCH/gamma.out
##genotoyoutfilename: SCRATCH/genotoy.out
##indtoyoutfilename: SCRATCH/indtoy.out
##unknowngender: U