risk: 1.5
SCRATCH: outfiles
indivname: indiv1.dat
snpname: snp.dat
genotypename: genodata
badsnpname: badsnps
tlreest: YES
seed: 1011
splittau: YES
fancyxtheta: YES
output: SCRATCH/act.out
trashdir: DIR/junktrashdir
checkit: NO
details: NO
numburn: 10
numiters: 10
simnumindivs: 1000
#casecontrol: 500 200
markersim: 1200
risksim: 2.0
emiter: 10
dotoysim: YES
cleaninit: YES
reestiter: 5
thetafilename: SCRATCH/theta.out
lambdafilename: SCRATCH/lambda.out
freqfilename: SCRATCH/freq.out
indoutfilename: SCRATCH/ind.out
snpoutfilename: SCRATCH/snp.out
ethnicfilename: SCRATCH/ethnic.out
genotoyoutfilename: SCRATCH/genotoy.out